Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809384.1_cds_XP_016495721.1_10007
CDS Infomation

[gene=LOC107814771] [db_xref=GeneID:107814771] [protein=synaptotagmin-3-like isoform X3] [protein_id=XP_016495721.1] [location=complement(join(20851..20979,21073..21201,21449..21820,22364..22613,22728..22804,22890..22964,23056..23157,23259..23386,24010..24133,24210..24260,24332..24430,25188..25298))] [gbkey=CDS]
Sequence

ATGGGATTTCTGAGCAGTCTCTTGGGAATTCTTGGCTTTGGAATTGGATTCTTGTTTGGT
CTTTTTATTGGATTTTATTTCTTCATCTACTCTCAGCCCACTGATGTTGAGGATCCTGTT
GTCAGTCCTCTTTGTGAGCTTGATACAGATGCATTACAAGATCTTATTCCGGATATTCCA
TTGTGGGTTAAAAGTCCAGATTACGATCGAGTAGACTGGTTAAACAAATTTCTTCAGAAT
ATGTGGCCTTTCCTTGATAAGGCTATTTGTAGCACAATTAGAAGCGTCGCAGAGCCCATA
TTTGCAGAATACATAGGGCAATATACGATAACAAAAATTGATTTTGAGACACTAACCCCT
GGAACTCTTCCGCCAGTACTTCAAGGTCTCAAGGTATACGAGACAAATGAGAGGGAGTTA
GTGATGGAACCAGCAATTAAATGGGCTGGCAACCCAAACATCGTGGTGGTAGTAACTTCA
TCATCTTTACAGAATCTAAAGATCAAATTGCAGTTGCTGGACTTACAAATTTTCGTCGCA
CCACGTGTTACTTTGAAACCTCTTGTACCTAGTTTTCCATGTTTTGCTAATATAGTGGTA
TCTATAATGGAGAAGCCACATGTTGATTTCGGACTGAAGGTTCTTGGTGGGGATGTTATG
GCAATCCCTGGACTTTATCGATATGTTCAGGAGATTATAAAGAAACAAGTAGCAGTCCTT
TATCACTGGCCTCAAACTCTTGAAATACCAGTTCTTGATGCTTCATTGGTGGGCATAAAG
AAGCCTGTTGGGATATTGCATGTTAAAGTGGTAAGAGCAATGAAACTCCTGAAGATGGAT
TTACTGGGATTATCTGATCCTTATGTTAAGCTAAGCTTGAGCGGAGACAGCCTGCCTTCT
AGAAAAACCTCCATCAAGAAGAAAAACCTGAATCCTGTGTGGAATGAAAGCTTCAAGCTT
ACTGTGAAGGATCCACAGTCCCAAATTCTTCACTTAGACGTCATTGATTGGGACAAGGTG
GGAGCACACGACCGCCTGGGATCACAATTACTTCCTTTAAAGCTTCTACAACCAAATGAA
ACAAAGGAATTCACTCTAGACTTACTTAAGAACTCAAGTATAAGTGTCGCACATGACAAG
AAGCAGAGAGGGCAGATTGTCGTTGAGCTGACATATGCCCCTTTCAGAGAGGATACTGAT
GGTATGAGTGGGCCTTTAAATAGCTTCAGTTGGAAGGAGAATGGGTTGGAAACGACATCT
GGTAATGATAGTCCAAGGGGAGCAGGTTTGCTATTTGTTACTGTCCAAGGAGCCAAAGAT
GTAGAGGGCTCACGTCACAATAATCCATATGTGGTCATATTTTTCAGAGGGGAAAAGAGA
AAATCCAAGATGGTTAAGAAAACACGTGATCCTCAATGGTGTGAAGAGTTCCATTTTATG
CTCGAAGAGCCTCCTGTCCATGAGAAAATCCATTTAGAGGTTTTGAGTAAGCGAAATGGC
ATCAGCTTTCGTTCAAAGGAGTCGCTTGGACATGTCGACATCAACCTTGATGATGTAGTT
CACAATGGACGTATAAATGAGAAATACCATCTAATAGATTCAAAGAATGGAGTCATACAT
GTTGAGTTGAGATGGAAGAGCATATGA

Peptide Sequence

PEP ID

XP_016495721.1
PEP Infomation

PREDICTED: synaptotagmin-3-like isoform X3 [Nicotiana tabacum]
Sequence

MGFLSSLLGILGFGIGFLFGLFIGFYFFIYSQPTDVEDPVVSPLCELDTDALQDLIPDIP
LWVKSPDYDRVDWLNKFLQNMWPFLDKAICSTIRSVAEPIFAEYIGQYTITKIDFETLTP
GTLPPVLQGLKVYETNERELVMEPAIKWAGNPNIVVVVTSSSLQNLKIKLQLLDLQIFVA
PRVTLKPLVPSFPCFANIVVSIMEKPHVDFGLKVLGGDVMAIPGLYRYVQEIIKKQVAVL
YHWPQTLEIPVLDASLVGIKKPVGILHVKVVRAMKLLKMDLLGLSDPYVKLSLSGDSLPS
RKTSIKKKNLNPVWNESFKLTVKDPQSQILHLDVIDWDKVGAHDRLGSQLLPLKLLQPNE
TKEFTLDLLKNSSISVAHDKKQRGQIVVELTYAPFREDTDGMSGPLNSFSWKENGLETTS
GNDSPRGAGLLFVTVQGAKDVEGSRHNNPYVVIFFRGEKRKSKMVKKTRDPQWCEEFHFM
LEEPPVHEKIHLEVLSKRNGISFRSKESLGHVDINLDDVVHNGRINEKYHLIDSKNGVIH
VELRWKSI

Transcript Sequence

Gene sequence data has not been registered.